Insertion junction: CLIP2.021782_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021782
Chromosome:chromosome 3
Location:3964000
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g171300 GYX1 (1 of 1) 1.1.3.15 - (S)-2-hydroxy-acid oxidase / Hydroxy-acid oxidase B; Glycolate oxidase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACTGAAGGCTCACAGACGGGCAGCTGCAGCGCAGGCGGTAAAGGATACCA
Internal bar code:ATACACACTTTCCTATCCGTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1956
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CACACAACGAAACAGGCCTG
Suggested primer 2:GACGGTGGAGAAGGTGAAGG