Insertion junction: CLIP2.021796_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021796
Chromosome:chromosome 10
Location:413376
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g420600 (1 of 2) PTHR22840//PTHR22840:SF12 - FAMILY NOT NAMED // WD REPEAT-CONTAINING PROTEIN 36 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAACACGCATGCGGATGCAGCTGGCATTTGTGAGGATCGATGCTGATCGC
Internal bar code:AATGTCGGATGGGAGGACCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:167
LEAP-Seq percent confirming:5.45455
LEAP-Seq n confirming:3
LEAP-Seq n nonconfirming:52
LEAP-Seq n unique pos:55

Suggested primers for confirmation by PCR

Suggested primer 1:CACCACGGACTTGAAGAGCT
Suggested primer 2:AGCAGCAGCCGTTTGATTTG