Insertion junction: CLIP2.021797_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.021797
Chromosome:chromosome 5
Location:264742
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g800510 (1 of 2) PTHR11655:SF14 - 54S RIBOSOMAL PROTEIN L6, MITOCHONDRIAL intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCGCCCTGCTGCTCCACGACGCCTCGGCCCCTTCCCATGAATCTTATC
Internal bar code:ATCGACTGTTGTGTTGACCTGT

Confirmation - LEAP-Seq

LEAP-Seq distance:572
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTGGCAGTAGCAGTGACA
Suggested primer 2:GGTAGAGAAGGGGTACGGGT