Insertion junction: CLIP2.021808_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021808
Chromosome:chromosome 4
Location:3419246
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g227600 (1 of 1) PTHR27000:SF77 - LEUCINE-RICH REPEAT PROTEIN KINASE-LIKE PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGGCTGCCTTGTCGGCCACAACCCCACCCACGCGCTTCCCACTTCCCACT
Internal bar code:TATCCAGCTAGGGATCGCGGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1667
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTACTCCCAGTTGCCTGC
Suggested primer 2:CCATTCCAAGAGGCTTCCGT