Insertion junction: CLIP2.021809_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.021809
Chromosome:chromosome 6
Location:2789464
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g800646 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTTGCGGGCTTGGTCGCCAGCGGCTTGGTCATCGCGGGGGCGTCCATGG
Internal bar code:GCTGGGCTAGCGAACGGTGCTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1866
LEAP-Seq percent confirming:94.7368
LEAP-Seq n confirming:36
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GGATGTCAGGGGATGTTGGG
Suggested primer 2:GACGGGCCCAGTCAGTTTTA