Insertion junction: CLIP2.021813_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021813
Chromosome:chromosome 12
Location:5441841
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g529600 RPA1 DNA-directed RNA polymerase I subunit 1; (1 of 1) K02999 - DNA-directed RNA polymerase I subunit RPA1 (RPA1, POLR1A) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TATGTGACACGCTGCCGCCGCCTCACCGCCGTGCCCACCCTGCCCCGCGC
Internal bar code:AACTGTGTAAGTTTATGAGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:4258
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:57

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGCCAGCTCTTTGGACTG
Suggested primer 2:CATCACCTGCCCCCTCATTT