Insertion junction: CLIP2.021822_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.021822
Chromosome:chromosome 12
Location:4325973
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g518900 AKR9 (1 of 4) 1.1.1.65 - Pyridoxine 4-dehydrogenase / Pyridoxine dehydrogenase; Aldo/keto reductase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGCGTTTCTTCGACATGGCGGGGGCTCAGGAGGCGTGCCAGTGTTGCT
Internal bar code:GCGACAATGCAAGGGGAGTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:617
LEAP-Seq percent confirming:95.4545
LEAP-Seq n confirming:21
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGTTTGCGGATGTTACCT
Suggested primer 2:CCGTGCAGGTGTTCACAAAG