Insertion junction: CLIP2.021823_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.021823
Chromosome:chromosome 3
Location:4070558
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g172150 (1 of 1) PTHR10663//PTHR10663:SF182 - GUANYL-NUCLEOTIDE EXCHANGE FACTOR // SH2 DOMAIN-CONTAINING PROTEIN 5 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCACGACTCCATGCGGCCGGCGCTGGCGCGGCTGGAGGTGGAGGCGGCG
Internal bar code:GTAGTCAGTGTATACTGAATTG

Confirmation - LEAP-Seq

LEAP-Seq distance:1596
LEAP-Seq percent confirming:81.4815
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GCGCATACCGTCAAATGGTC
Suggested primer 2:ACGGTTGGAACGATGACTGG