Insertion junction: CLIP2.021827_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.021827
Chromosome:chromosome 9
Location:1329043
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400500 (1 of 3) PF14494 - Domain of unknown function (DUF4436) (DUF4436) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACCGCAAAAACTGCGCGCGCCAAGGAGACCTCCGCCAATGTGTTCATGT
Internal bar code:CTTGTATCGAGCTGTATGCACC

Confirmation - LEAP-Seq

LEAP-Seq distance:350
LEAP-Seq percent confirming:66.6667
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CCAAGGGTCCACCACATCTC
Suggested primer 2:GGCCCCTGCAGATCATACTC