Insertion junction: CLIP2.021827_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021827
Chromosome:chromosome 9
Location:1329045
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400500 (1 of 3) PF14494 - Domain of unknown function (DUF4436) (DUF4436) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTAGAACACCGGCAGTGCGATGCCAATCAAGATGGGAGTCATGACCAAG
Internal bar code:GTTGATAGAGTCAACCCTGTAA

Confirmation - LEAP-Seq

LEAP-Seq distance:892
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GGCCCCTGCAGATCATACTC
Suggested primer 2:CCAAGGGTCCACCACATCTC