Insertion junction: CLIP2.021831_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021831
Chromosome:chromosome 4
Location:424660
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217917 (1 of 25) IPR001005//IPR009057//IPR017930 - SANT/Myb domain // Homeodomain-like // Myb domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAAGTGTTAACCTGATATGTGTTACACCATCTAGTCCCGTGTGCACAGCG
Internal bar code:GAAACTATAGATATCTCGATCG

Confirmation - LEAP-Seq

LEAP-Seq distance:2973
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:111
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:111

Suggested primers for confirmation by PCR

Suggested primer 1:GATGTGTTGCATCCGGGAGA
Suggested primer 2:CAGCTTGGCATAGGTCCACA