Insertion junction: CLIP2.021831_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.021831
Chromosome:chromosome 4
Location:424680
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g217917 (1 of 25) IPR001005//IPR009057//IPR017930 - SANT/Myb domain // Homeodomain-like // Myb domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGCAGCGCCATTTGAAAGTGTGCAACTGCCGCAACGCGACTTCACAACTC
Internal bar code:GCCCTGCCAAGGACCAGTTATT

Confirmation - LEAP-Seq

LEAP-Seq distance:552
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:12

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCTTGGCATAGGTCCACA
Suggested primer 2:GATGTGTTGCATCCGGGAGA