Insertion junction: CLIP2.021836_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021836
Chromosome:chromosome 3
Location:5273688
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g182400 (1 of 7) K18932 - palmitoyltransferase (ZDHHC) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCATGTGCGTATCAACCGCCGCCGGCTGCAGGCTGGATCACGGCGGCCT
Internal bar code:CCGTTTCTGTAGTTGAGGCGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2032
LEAP-Seq percent confirming:59.2593
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:33
LEAP-Seq n unique pos:81

Suggested primers for confirmation by PCR

Suggested primer 1:GGTGGGGGTGTGGTCATTAG
Suggested primer 2:TGTTGAACCAGCCACCTTGT