Insertion junction: CLIP2.021837_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.021837
Chromosome:chromosome 17
Location:3201978
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g721400 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTAGGACAAGTTCATCCCTTGGGGTCACGGGGCGCCTGTAGGTGCGTAC
Internal bar code:ATGGTAGCCGAGGCGTCTGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2845
LEAP-Seq percent confirming:91.1765
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:34

Suggested primers for confirmation by PCR

Suggested primer 1:CACGGGATCGGGAACTTTGA
Suggested primer 2:GCTTTCGTCCCTGAAATCGC