Insertion junction: CLIP2.021839_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.021839
Chromosome:chromosome 17
Location:858674
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g702250 TRP4 Transient receptor potential ion channel protein; (1 of 6) PTHR10582 - TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACAACCCAACAATACACATCACGCAACACAACACAACATGCAGTAACAT
Internal bar code:ATGGTGAATTAGGTTTGTGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:589
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACAGCACATACCTCCAC
Suggested primer 2:GAGGTGTTGGATGAGGAGGC