Insertion junction: CLIP2.021839_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021839
Chromosome:chromosome 17
Location:858677
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g702250 TRP4 Transient receptor potential ion channel protein; (1 of 6) PTHR10582 - TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTTGTGAAGGTGAAAGTGGGTAGGGAGCACGAAAGGCCAGGCAAGGAACA
Internal bar code:ATGGTGAATTAGGTTTGTGCCT

Confirmation - LEAP-Seq

LEAP-Seq distance:809
LEAP-Seq percent confirming:51.7241
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GAGGTGTTGGATGAGGAGGC
Suggested primer 2:AGCACAGCACATACCTCCAC