Insertion junction: CLIP2.021871_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.021871
Chromosome:chromosome 10
Location:6671390
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g466350 CDPK2,SNRK2H (1 of 1) PTHR24343:SF169 - SERINE/THREONINE-PROTEIN KINASE SRK2D-RELATED; snRK1 family in Chlamydomonas, subgroup 2 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACATCTCGACCCGCAGTACCGCGCCCCGCCAGCGGACCTGTGACGTCC
Internal bar code:CCGTTATGAGATGCTTACGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:82
LEAP-Seq percent confirming:42.1053
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:11
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:AGCACTTGTCACGGGTACAG
Suggested primer 2:GAGAAGTGCTCCCCTGGTTC