Insertion junction: CLIP2.021873_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021873
Chromosome:chromosome 13
Location:3695450
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g588271 (1 of 1) PF07556 - Protein of unknown function (DUF1538) (DUF1538) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAAGCGCATTCGGCAATTCAGTGCCTGTCTCGTAAGCAACTGCACTGCC
Internal bar code:TGCGCACCTTTGACGAAGGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:4494
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:92
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:92

Suggested primers for confirmation by PCR

Suggested primer 1:GCGACGGTCATGGTATCCAT
Suggested primer 2:CGAATGCAGAAAGCCGTACG