Insertion junction: CLIP2.021876_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.021876
Chromosome:chromosome 11
Location:3876093
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g479650 CHIP,CHIP1 (1 of 1) K09561 - STIP1 homology and U-box containing protein 1 (STUB1, CHIP); Carboxyl terminus of Hsc70-interacting protein CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCCATGGTCAGCGGGCTGCGGCGGGTGTTGTGTTGGTTGGCGCGGTACG
Internal bar code:ATCCTGGCTCTGATAAAGTCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3922
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:TGCGCCGCAACAAACAAATA
Suggested primer 2:CCTGCGATCAAGTCATTGCG