Insertion junction: CLIP2.021880_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.021880
Chromosome:chromosome 3
Location:7718337
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g203600 GDP6,GDPD6 Glycerophosphoryl diester phosphodiesterase, probably a phospholipase C; (1 of 1) IPR000909//IPR017946//IPR030395 - Phosphatidylinositol-specific phospholipase C, X domain // PLC-like phosphodiesterase, TIM beta/alpha-barrel domain // Glycerophosphodiester phosphodiesterase domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTGGCGGGTGACGCGTTGGGCGGTCTCCGACCGACAGAAAGGCAACAGG
Internal bar code:CTACCACATGGCAATGTACGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2702
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGAGCAGGAGCAGGAAT
Suggested primer 2:AATGACTTACCCGCCCACTG