Insertion junction: CLIP2.021882_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021882
Chromosome:chromosome 3
Location:3869579
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g170450 (1 of 239) IPR016024 - Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGTGGGCGGATGGGCGGCCGTGCTGTCCGGCGGTCTGTGGAAGGGGTGG
Internal bar code:TTTCCACCCAACCGAGGCTTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2722
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CAGCCAACAAAGTCACAGGC
Suggested primer 2:CTCACACAGCTGTAAGGCCA