Insertion junction: CLIP2.021884_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.021884
Chromosome:chromosome 6
Location:3397327
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278093 ELG20 Exostosin-like glycosyltransferase 20; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGCTGCTGTTTCCCAGGCCAATCAACAGCCGTGGTGACGTTTTGCACGT
Internal bar code:TTTGGATCTAACGGTTCAGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3071
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:67
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:67

Suggested primers for confirmation by PCR

Suggested primer 1:CACGGAATGCTCGATGCTTG
Suggested primer 2:AGGCACATAGTGACAGGCAC