Insertion junction: CLIP2.021886_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.021886
Chromosome:chromosome 16
Location:507762
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g692902 AHI1 Abelson-helper integration site 1; (1 of 3) PTHR22847:SF361 - JOUBERIN intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATCGCAAACACGCAACACGGTCACACCGCCCTGGCCTCGCCCCCATGACG
Internal bar code:GGGTGTTTTTCTGAGATAGCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2585
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:GCAATACCAGCAACACCAGC
Suggested primer 2:GTGGGGTTAAGGGGATTGGG