Insertion junction: CLIP2.021896_3

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021896
Chromosome:chromosome 12
Location:3037612
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g501600 BLZ8 (1 of 6) PF07716 - Basic region leucine zipper (bZIP_2); bZIP transcription factor 3'UTR
Cre12.g501703 (1 of 100) IPR001810 - F-box domain 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ATTCTGTAACATGACCTGGTCTTATTCCCAGGTTCCAGGTTTCAGCCCCA
Internal bar code:AACAACGTTGAAATGACCAAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:3423
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:GTACGATACGCGGGCTACAA
Suggested primer 2:AGGAGTGGTTTGAGTGCGAG