Insertion junction: CLIP2.021898_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021898
Chromosome:chromosome 3
Location:6323028
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g192250 PHC69 (1 of 24) IPR003882//IPR024616 - Pistil-specific extensin-like protein // Pherophorin; Pherophorin-chlamydomonas homolog 69 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCTTCACCGGAGCCGCCTGTGCCGCCCAGCCCAGCGCCTCCCTACCCGCC
Internal bar code:GACGATGGATTCCTGTAATCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:1683
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TCCTCGAAATCCGCGAAGAG
Suggested primer 2:CCTTCTCCAAAGCCACCCAG