Insertion junction: CLIP2.021908_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021908
Chromosome:chromosome 4
Location:2166836
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g220000 (1 of 4) IPR000719//IPR001245//IPR002290//IPR011009 - Protein kinase domain // Serine-threonine/tyrosine-protein kinase catalytic domain // Serine/threonine/dual specificity protein kinase, catalytic domain // Protein kinase-like domain intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGAGGCAGGGGCTCTCATCCCATGGACTAAGAGGCGGCGTGGCCGCACC
Internal bar code:TATTTATACAAGAGGGTCATCT

Confirmation - LEAP-Seq

LEAP-Seq distance:250
LEAP-Seq percent confirming:11.1111
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:8
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:AGGAGGCTGTGTTTGGACTC
Suggested primer 2:CGTCGAAAATGGTGCGCTAG