Insertion junction: CLIP2.021912_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.021912
Chromosome:chromosome 3
Location:5227538
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g181950 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCGGCGGGAGGTCGATTGCGGCATATTGCGGCTTGGACGCACGTGGCC
Internal bar code:CAGGTCGTGATATCGGGAACAT

Confirmation - LEAP-Seq

LEAP-Seq distance:2120
LEAP-Seq percent confirming:97.5
LEAP-Seq n confirming:39
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:CACTGCTCAGTTCCTGCTGA
Suggested primer 2:AAACAATCACCAACGCAGCC