Insertion junction: CLIP2.021943_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.021943
Chromosome:chromosome 13
Location:1645447
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g573650 SRS8,SRS5 Serine/arginine-rich pre-mRNA splicing factor; (1 of 89) PF00076 - RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) (RRM_1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TACCCACCTGCATGCATACCCCCTTGTGCACAACCAAGCATGGCCAAGCG
Internal bar code:TTAGTCATCTGCTTATTTTGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2365
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:TAGCAGTGCCACCAGTCAAG
Suggested primer 2:GCGGAACATCCCCTTACACA