Insertion junction: CLIP2.021948_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021948
Chromosome:chromosome 7
Location:3316266
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g334750 PPP30 (1 of 3) PTHR12320//PTHR12320:SF15 - PROTEIN PHOSPHATASE 2C // SUBFAMILY NOT NAMED; Phosphoprotein phosphatase 2C-related intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGTAAGTTCCCCGCTCAGCGGATTTCAGGCGTGAATATGTGTTCGCGA
Internal bar code:GTTCGACCGGGATATGGCGGGA

Confirmation - LEAP-Seq

LEAP-Seq distance:5123
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:117
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:117

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGAGCAAGCTCACACTCA
Suggested primer 2:CGGCTCTCCAATCAGGGATC