Insertion junction: CLIP2.021954_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021954
Chromosome:chromosome 11
Location:543235
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467599 (1 of 18) PTHR10774 - EXTENDED SYNAPTOTAGMIN-RELATED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCCCTGGAAGCCGGTGTGATGTCGGTGACGATGGAGTTCGGCAAGGACC
Internal bar code:TCTAGGCGAGATATGGGGAGCC

Confirmation - LEAP-Seq

LEAP-Seq distance:860
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CGGATGATGCAGTAGGGGTC
Suggested primer 2:AACACTCACTTGCCGAACCA