Insertion junction: CLIP2.021958_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021958
Chromosome:chromosome 12
Location:4974521
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g524850 (1 of 1) IPR000104//IPR003593//IPR027417 - Antifreeze protein, type I // AAA+ ATPase domain // P-loop containing nucleoside triphosphate hydrolase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCGACACAATTACGCTGCTGCGCAAGCGGCACTTGCGCGTCAGCCCTGCG
Internal bar code:AATAACTTATGTTGCTGGAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3660
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:40
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:40

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGAGCTCACCCTAACCCA
Suggested primer 2:GGTATTTGCTGCTGCTGCTG