Insertion junction: CLIP2.021970_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.021970
Chromosome:chromosome 6
Location:2394700
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g268550 GTR,CGL121,CSL1 Cellulose-synthase-like 1; (1 of 1) 2.4.1.32 - Glucomannan 4-beta-mannosyltransferase / Glucomannan-synthase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCTCCAAGGAGAACAGCGGCAAGCGCGAGCAGGCGCGCCTGAAGAAGAAG
Internal bar code:CGTAGGGCTGTGTAACGAGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:799
LEAP-Seq percent confirming:85.7143
LEAP-Seq n confirming:6
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:AAATGGTGTGTGGGTGGGTT
Suggested primer 2:TCGCCGCCATGATCTTCTAC