Insertion junction: CLIP2.021972_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.021972
Chromosome:chromosome 2
Location:2173876
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g089450 HRP5 Hydroxyproline-rich glycoprotein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTCACCTGCGGGCGTGGTGGGCGTCTTCGGTCGCGACTTGGGCAGCCG
Internal bar code:GGCATGGCTTGTTCCAGCTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:2694
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GCACATGTCTCCTCGCGATA
Suggested primer 2:CGCGATCCCTAGCTTGCTTA