Insertion junction: CLIP2.021972_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021972
Chromosome:chromosome 2
Location:2173876
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g089450 HRP5 Hydroxyproline-rich glycoprotein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGGGGTATGTGTAGACTCAACGCATGCACTACCAGTACGGGAGGCACCTG
Internal bar code:CTGAGGGTGTGAACATTTTCGT

Confirmation - LEAP-Seq

LEAP-Seq distance:958
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGATCCCTAGCTTGCTTA
Suggested primer 2:GCACATGTCTCCTCGCGATA