Insertion junction: CLIP2.021973_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.021973
Chromosome:chromosome 2
Location:2419296
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g091350 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCAGCACCAGCAGCACCAGCAGCAGCAGGTGGGGCAGCAGCACCAGATGG
Internal bar code:AGAATGGGGGTCGGTCGGAGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3402
LEAP-Seq percent confirming:36.2069
LEAP-Seq n confirming:42
LEAP-Seq n nonconfirming:74
LEAP-Seq n unique pos:116

Suggested primers for confirmation by PCR

Suggested primer 1:CTGGCTGGCAGTCTAGCTTT
Suggested primer 2:TGGCTTAGTTGGGCATCTGG