Insertion junction: CLIP2.021980_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.021980
Chromosome:chromosome 9
Location:5572199
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g409550 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCTGCAGCTGGCGGCGGCGGTGGCGGCGGTGGCCTGGGCTGGCAATAG
Internal bar code:TCTAAAACTATGCCATTCACCT

Confirmation - LEAP-Seq

LEAP-Seq distance:2043
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:22

Suggested primers for confirmation by PCR

Suggested primer 1:CTCCTTGTGCGAGGTGTGAT
Suggested primer 2:CTGCTACTGCCGAGGAAGAG