Insertion junction: CLIP2.021982_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.021982
Chromosome:chromosome 6
Location:3601495
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278131 (1 of 1) IPR000104//IPR002083//IPR008974 - Antifreeze protein, type I // MATH/TRAF domain // TRAF-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCTCTGTCCCACCCTCACCTGGCAGCGCGGTTCCTCCCGCAGCGGGCG
Internal bar code:GGACTAAGAGCTTTATTGACAA

Confirmation - LEAP-Seq

LEAP-Seq distance:882
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:10

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGATCAAGTGGTGGACCC
Suggested primer 2:TGATGGCCTTGGAGCAGAAG