Insertion junction: CLIP2.021986_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.021986
Chromosome:chromosome 6
Location:1027434
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g256950 SND1D SAND domain-encoding short ORF intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGGAGCAGCAGGGATTAGCGGTATGGCGCATGGGAGGGAGGTACGCGTG
Internal bar code:CTGTCTGAGAATACAATGGATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1868
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:GTAGCCACTCGGTTGGTTGA
Suggested primer 2:CAGTGCTAACGGTCTCAGCA