Insertion junction: CLIP2.021995_3

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.021995
Chromosome:chromosome 8
Location:1227282
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g363350 (1 of 2) IPR003034//IPR009061 - SAP domain // Putative DNA-binding domain 5'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGCCTTGCGCACAGTGCAAGAGCCCGTGCGCACGTTCCAGCGAAAGGC
Internal bar code:TTCGGCTAGGAGAGGTTGAGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:1666
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:9
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:9

Suggested primers for confirmation by PCR

Suggested primer 1:CCCTGGCTTCTGGAGTTCAG
Suggested primer 2:CGTATACGCACCCGATTCCA