Insertion junction: CLIP2.021998_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.021998
Chromosome:chromosome 3
Location:6734052
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g196200 (1 of 2) PTHR17630//PTHR17630:SF32 - DIENELACTONE HYDROLASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACATGGTCAACTCCAATTCCATCTAGTGCGAGCCCACGGGGCTCGGCTC
Internal bar code:AGTGAGGCGCCTTAATGTAATT

Confirmation - LEAP-Seq

LEAP-Seq distance:1911
LEAP-Seq percent confirming:97.7778
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GCCTCTCCTAAGGGTCCTCA
Suggested primer 2:GAGATCGAACAGCGGGGTAG