Insertion junction: CLIP2.022005_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.022005
Chromosome:chromosome 10
Location:1010943
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g424850 SPL5,PRP31 (1 of 1) K12844 - U4/U6 small nuclear ribonucleoprotein PRP31 (PRPF31); Pre-mRNA-splicing factor intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTAGGCCGCGTCGGGCCCGCCCACTGGCACGGGCCTTCCGCCCTCCCCGC
Internal bar code:TCGTAAAATGGAAGGGTCCATG

Confirmation - LEAP-Seq

LEAP-Seq distance:1558
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:41
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:41

Suggested primers for confirmation by PCR

Suggested primer 1:CAACACGCACACCTGAACTG
Suggested primer 2:TCTGAAGACGAGGAGGGGAG