Insertion junction: CLIP2.022012_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.022012
Chromosome:chromosome 1
Location:1760892
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g009731 (1 of 781) IPR000104 - Antifreeze protein, type I CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGAAGCCATGTGTGAGGGAGGAGGAGCCGGCAGCGACGGAGTCGGCGGTG
Internal bar code:CTCTCATGAATGCCCTGCTAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2210
LEAP-Seq percent confirming:76.1905
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:21

Suggested primers for confirmation by PCR

Suggested primer 1:ACATCGGATCGCTAAGCCTG
Suggested primer 2:CGGTTGGCTTGCTTGGATTC