Insertion junction: CLIP2.022036_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.022036
Chromosome:chromosome 17
Location:1236366
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g705050 LIC1 (1 of 3) PF02931//PF02932 - Neurotransmitter-gated ion-channel ligand binding domain (Neur_chan_LBD) // Neurotransmitter-gated ion-channel transmembrane region (Neur_chan_memb); Ligand-gated ion-channel CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGTGGCCAAGCTTAACAACACCGCACACACCAAGGGTGAGGCAGGGCC
Internal bar code:GGCAGTAGCTTCCCGAAGCCAC

Confirmation - LEAP-Seq

LEAP-Seq distance:463
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AAGCCGCATCGCCAAAATTT
Suggested primer 2:CCGAGTCTTAAAGCGCATGC