Insertion junction: CLIP2.022039_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.022039
Chromosome:chromosome 13
Location:2928831
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g583500 TAF2,GEX2 (1 of 5) IPR000104//IPR016024 - Antifreeze protein, type I // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTGAACAGGCCGGGTGCATGTACCGTACTTGCGCGCACGCGCCGTTCG
Internal bar code:ATGAGCACTAGCGGCGTTTTTC

Confirmation - LEAP-Seq

LEAP-Seq distance:1141
LEAP-Seq percent confirming:82.3529
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:ACCGTAGCATCAACAGCACA
Suggested primer 2:CGCTGATGCAATGGATGTGG