Insertion junction: CLIP2.022042_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.022042
Chromosome:chromosome 4
Location:1301702
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre04.g214650 BGS5,GSL1,GTR19 Glucan synthase-like 1; (1 of 7) 2.4.1.34 - 1,3-beta-glucan synthase / UDP-glucose-1,3-beta-D-glucan glucosyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGACATGCGGCGCCGGCGCGAGGCGAGCAGCACCTCTGAGCGGGTGGGTG
Internal bar code:GAGGGTTGTACTGGCAGTTATG

Confirmation - LEAP-Seq

LEAP-Seq distance:366
LEAP-Seq percent confirming:94.1176
LEAP-Seq n confirming:16
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:CGCGGAAATTATGCAGGCTC
Suggested primer 2:AAGCAAAACACATGCCGACC