Insertion junction: CLIP2.022057_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.022057
Chromosome:chromosome 3
Location:8997820
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g203457 (1 of 38) IPR002048//IPR011992 - EF-hand domain // EF-hand domain pair intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGTGAAATGTTGATTACGTGAGCGCCATCGCCACGCCTTGCGCCTTGACA
Internal bar code:GCGAACCGACCTCATGGGCACA

Confirmation - LEAP-Seq

LEAP-Seq distance:379
LEAP-Seq percent confirming:87.5
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTGTGTGTGTGTGTTCCG
Suggested primer 2:CTGGGGGCGATGAGAGATTC