Insertion junction: CLIP2.022058_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.022058
Chromosome:chromosome 3
Location:732256
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g145967 (1 of 2) K15437 - aminoacyl tRNA synthase complex-interacting multifunctional protein 1 (AIMP1, ARC1) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GAGAATATCTGAGGTCTGTGGTATACCGATACTGGGGAGGGCACGCACGC
Internal bar code:ATTCTTTCCGCACACGGAGAAG

Confirmation - LEAP-Seq

LEAP-Seq distance:323
LEAP-Seq percent confirming:14.2857
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:14

Suggested primers for confirmation by PCR

Suggested primer 1:GGTATTTACAACCCCCGCCA
Suggested primer 2:AACCCCACCTCAACCTTGAC