Insertion junction: CLIP2.022061_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.022061
Chromosome:chromosome 13
Location:824262
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g567200 (1 of 40) PTHR23257//PTHR23257:SF513 - SERINE-THREONINE PROTEIN KINASE // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TAGGCGACCTCCACCATGGTCAGGCCCTGCCAGGGGTGCTGGCCCGTGAG
Internal bar code:GATCGGAGCCCGACATTGTGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:1336
LEAP-Seq percent confirming:85.1852
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GTCTCCGTCACGTTTGGACT
Suggested primer 2:AAGCAAGCAAGCGGATGTTG