Insertion junction: CLIP2.022064_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.022064
Chromosome:chromosome 1
Location:3998713
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g026250 AGA1 Alpha-galactosidase; (1 of 1) 3.2.1.22 - Alpha-galactosidase / Melibiase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCTGGCGCTGTCCTAGCACACTCACACATGTCCTCGTTCAAACACACAC
Internal bar code:CTGAACATGTTAACATTTTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:1397
LEAP-Seq percent confirming:93.75
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:16

Suggested primers for confirmation by PCR

Suggested primer 1:TGAGGTTCATGTCGCTGCAT
Suggested primer 2:GCCCGTTGTGTTTGACAGAC