Insertion junction: CLIP2.022065_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.022065
Chromosome:chromosome 5
Location:1309811
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00214174

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCACGGTATGTGACACACGGGATAAACCCTTTTTATTCAAAAGGGAAGTG
Internal bar code:TAAAGTCCCCAGGAACTGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:4042
LEAP-Seq percent confirming:93.9394
LEAP-Seq n confirming:62
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:66

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCCGGACGGTTCAAATAA
Suggested primer 2:AACTGCATGCTGTACGGTCA